Publications
This is a listing of published papers (PubMed, Google Scholar, ORCID, ResearchGate, ). Articles marked with * appeared with the note “These authors contributed equally”. Scroll to the bottom of the list for articles that appeared as part of conference proceedings.
Journal Papers
- Luigi Lorenzini, Lyduine E. Collij, Niccoló Tesi, Natàlia Vilor-Tejedor, Silvia Ingala, Kaj Blennow, Christopher Foley, Giovanni B Frisoni, Sven Haller, Henne Holstege, Sven van der Lee, Pablo Martinez-Lage, Riccardo E Marioni, Daniel L McCartney, John O’ Brien, Tiago Gil Oliveira, Pierre Payoux, Marcel Reinders, Craig Ritchie, Philip Scheltens, Adam J Schwarz, Carole H Sudre, Adam D Waldman, Robin Wolz, Gael Chatelat, Michael Ewers, Alle Meije Wink, Henk JMM Mutsaerts, Juan Domingo Gispert, Pieter Jelle Visser, Betty M. Tijms, Andre Altmann, Frederik Barkhof
Alzheimer’s disease Genetic Pathways Impact on Cerebrospinal Fluid Biomarkers And Imaging Endophenotypes In Non-Demented Individuals
Alzheimer’s Dement. 2024; 1-15. https://doi.org/10.1002/alz.14096. - Andre Altmann, Leon M Aksman, Neil P Oxtoby, Alexandra Young, ADNI, Daniel C Alexander, Frederik Barkhof, Maryam Shoai, John Hardy, Jonathan M Schott
Towards cascading genetic risk in Alzheimer’s disease
Brain, 2024, awae176, https://doi.org/10.1093/brain/awae176 - Dorina-Gabriela Condurache, Stefania D’Angelo, Ahmed M Salih, Liliana Szabo, Celeste McCracken, Adil Mahmood, Elizabeth M Curtis, Andre Altmann, Steffen E Petersen, Nicholas C Harvey, Zahra Raisi-Estabragh
Bone health, cardiovascular disease, and imaging outcomes in UK Biobank: a causal analysis
JBMR Plus, Volume 8, Issue 6, June 2024, ziae058, https://doi.org/10.1093/jbmrpl/ziae058 - Zahra Raisi-Estabragh, Liliana Szabo, Art Schuermans, Ahmed Salih, Calvin WL Chin, Hajnalka Vágó, Andre Altmann, Fu Siong Ng, Pankaj Garg, Sofia Pavanello, Thomas H. Marwick, Steffen E. Petersen
Non-invasive techniques for tracking biological aging of the cardiovascular system.
JACC: Cardiovascular Imaging, (in press). - Ahmed M. Salih, Ilaria Boscolo Galazzo, Gloria Menegaz, and André Altmann.
Leukocyte Telomere Length and Cardiac Structure and Function: A Mendelian Randomization Study.
Journal of the American Heart Association 13, no. 3 (2024): e032708. - Ahmed Salih, Maddalena Ardissino, Aaron Z. Wagen, Andrew Bard, Liliana Szabo, Mina Ryten, Steffen E. Petersen, André Altmann and Zahra Raisi‐Estabragh
Genome‐Wide Association Study of Pericardial Fat Area in 28 161 UK Biobank Participants
JAHA, 2023, (in press). https://doi.org/10.1161/JAHA.123.030661 - Yukun Zhou, Mark A Chia, Siegfried K Wagner, Murat S Ayhan, Dominic J Williamson, Robbert R Struyven, Timing Liu, Moucheng Xu, Mateo G Lozano, Peter Woodward-Court, Yuka Kihara, Andre Altmann, Aaron Y Lee, Eric J Topol, Alastair K Denniston, Daniel C Alexander, Pearse A Keane
A foundation model for generalizable disease detection from retinal images.
Nature, 2023, 622, 156–163. https://doi.org/10.1038/s41586-023-06555-x - Carlos Estevez-Fraga, Andre Altmann, Christopher S Parker, Rachael Scahill, Beatrice Costa, Zhongbo Chen, Claudia Manzoni, Angeliki Zarkali, Alexandra Durr, Raymund AC Roos, Bernhard Landwehrmeyer, Blair R Leavitt, Geraint Rees, Sarah J Tabrizi, Peter McColgan
Genetic topography and cortical cell loss in Huntington’s disease link development and neurodegeneration.
Brain, 2023, awad275. https://doi.org/10.1093/brain/awad275 - Leon Aksman, Neil Oxtoby, Marzia Scelsi, Peter Wijeratne, Alex Young, Isadora Lopes Alves, Lyduine Collij, Jake Vogel, Frederik Barkhof, Daniel Alexander, Andre Altmann
A data-driven study of Alzheimer’s disease related amyloid and tau pathology progression
Brain, 2023, (in press) [pre-print] - Ana Lawry Aguila, Alejandra Jayme, Nina Montaña-Brown, Vincent Heuveline, Andre Altmann
Multi-view-AE: A Python package for multi-view autoencoder models
Journal of Open Source Software, 2023, 8(85), 5093, https://doi.org/10.21105/joss.05093 - Hanyi Chen, Alexandra Young, Neil P Oxtoby, Frederik Barkhof, Daniel C Alexander, Andre Altmann
Transferability of Alzheimer’s disease progression subtypes to an independent population cohort
NeuroImage, 2023, 271, 120005 - Eric de Silva, Carole H Sudre, Jo Barnes, Marcia A Scelsi, Andre Altmann
Polygenic coronary artery disease association with brain atrophy in the cognitively impaired
Brain Communications. 2022;4(6):fcac314. doi: 10.1093/braincomms/fcac314. - Ahmed Salih, Ilaria B Galazzo, Steffen E Petersen, Karim Lekadir, Petia Radeva, Gloria Menegaz, Andre Altmann
Telomere length is causally connected to brain MRI image derived phenotypes: A mendelian randomization study.
PLoS One. 2022;17(11):e0277344. doi: 10.1371/journal.pone.0277344. - Mohammed Janahi, Leon M Aksman, Jonathan M Schott, Younes Mokrab, Andre Altmann
Nomograms of human hippocampal volume shifted by polygenic scores
Elife, 2022, 11, e78232 - Seymour M Lopez, Leon M Aksman, Neil P Oxtoby, Sjoerd B. Vos, Jun Rao, …., Carrie R McDonald, Daniel C Alexander, Sanjay M Sisodiya, Andre Altmann, The ENIGMA Epilepsy Working Group
Event-based modelling in temporal lobe epilepsy demonstrates progressive atrophy from cross-sectional data
Epilepsia, 2022, (in press). doi: https://doi.org/10.1111/epi.17316 - Suhnyoung Jun, Thomas H Alderson, Andre Altmann, Sepideh Sadaghiani
Dynamic trajectories of connectome state transitions are heritable
NeuroImage, 2022, 256:119274. doi: https://doi.org/10.1016/j.neuroimage.2022.119274 - Derek S Andrews, Leon Aksman, Connor M Kerns, Joshua K Lee, Breanna M Winder-Patel, Danielle Jenine Harvey, Einat Waizbard-Bartov, Brianna Heath, Marjorie Solomon, Sally J Rogers, Andre Altmann, Christine Wu Nordahl, David G Amaral
Association of amygdala development with different forms of anxiety in autism spectrum disorder
Biological Psychiatry, 2022, 91(11), 977-987. - Leon M.Aksman, Peter A.Wijeratne, Neil P. Oxtoby, Arman Eshaghi, Cameron Shand, Andre Altmann, Daniel C. Alexander, Alexandra L. Young
pySuStaIn: A Python implementation of the Subtype and Stage Inference algorithm
SoftwareX, 2021, 100811. doi: https://doi.org/10.1016/j.softx.2021.100811 - Fatin N Zainul Abidin, Marzia A Scelsi, Sally J Dawson*, Andre Altmann*
Glucose hypometabolism in the Auditory Pathway in Age Related Hearing Loss in the ADNI cohort
NeuroImage: Clinical, 2021, (in press). doi: https://doi.org/10.1016/j.nicl.2021.102823 - Ahmed Salih, Ilaria Boscolo Galazzo, Zahra Raisi-Estabragh, Elisa Rauseo, Polyxeni Gkontra, Steffen E Petersen, Karim Lekadir, André Altmann, Petia Radeva, Gloria Menegaz
Brain Age Estimation at Tract Group Level and its Association with Daily Life Measures, Cardiac Risk Factors and Genetic Variants
Scientific Reports, 2021 (in press). - Andre Altmann†, Mina Ryten†, Martina Di Nunzio†, Teresa Ravizza, Daniele Tolomeo, Regina H Reynolds, …, ENIGMA-Epilepsy Working Group, …, EpiPGX Consortium, Maria Thom, Christopher D Whelan, Paul Thompson, Carrie R McDonald, Annamaria Vezzani*, Sanjay M Sisodiya*
A systems-level analysis highlights microglial activation as a modifying factor in common epilepsies
Neuropathology and Applied Neurobiology, 2021 (in press). doi: https://doi.org/10.1111/nan.12758 [preprint] - Ezequiel Gleichgerrcht, Brent C Munsell, Saud Alhusaini, …, Paul M Thompson, Sanjay M Sisodiya, Carrie R McDonald, Leonardo Bonilha, Andre Altmann, Chantal Depondt, Marian Galovic, Sophia I Thomopoulos, Roland Wiest
Artificial intelligence for classification of temporal lobe epilepsy with ROI-level MRI data: A worldwide ENIGMA-Epilepsy study
NeuroImage: Clinical, 2021, 31:102765. doi: https://doi.org/10.1016/j.nicl.2021.102765. - Fatin Zainul Abidin, Helena R. R. Wells, Andre Altmann*, Sally J. Dawson*
Hearing difficulty and Alzheimer’s disease are linked by shared common genetic vulnerability rather than shared genetic architecture
npj Aging and Mechanism of Disease, 2021 (in press). doi: https://doi.org/10.1038/s41514-021-00069-4 - Simona Balestrini, Seymour M Lopez, Krishna Chinthapalli, Narek Sargsyan, Rita Demurtas, Sjoerd Vos, Andre Altmann, Mike Suttie, Peter Hammond, Sanjay M Sisodiya
Increased facial asymmetry in focal epilepsies associated with unilateral lesions
Brain Communications, 2021 (in press). doi: https://doi.org/10.1093/braincomms/fcab068 - Michael E. Belloy, Sarah J. Eger, Yann Le Guen, Valerio Napolioni, Kacie D. Deters, Hyun-Sik Yang, Marzia A. Scelsi, Tenielle Porter, Sarah-Naomi James, Andrew Wong, Jonathan M. Schott, Reisa A. Sperling, Simon M. Laws, Elisabeth C. Mormino, Zihuai He, Summer S. Han, Andre Altmann, Michael D. Greicius
KL*VS Heterozygosity Reduces Brain Amyloid in Asymptomatic at Risk APOE*4 Carriers
Neurobiology of Aging, 2021 (in press). doi: https://doi.org/10.1016/j.neurobiolaging.2021.01.008 - Marzia A Scelsi, Valerio Napolioni, Michael D Greicius, Andre Altmann, Alzheimer’s Disease Neuroimaging Initiative, Alzheimer’s Disease Sequencing Project
Network propagation of rare mutations in Alzheimer’s disease reveals tissue-specific hub genes and communities
PLoS Comput Biol, 2020 (in press). pre-print on bioRxiv: doi: https://doi.org/10.1101/781203 - Valerio Napolioni, Marzia A. Scelsi, Raiyan R. Khan, Andre Altmann, Michael D. Greicius
Recent Consanguinity and Outbred Autozygosity are Associated with Increased Risk of Late-Onset Alzheimer’s Disease
Frontiers In Genetics, 2020, 11:1864. doi: https://doi.org/10.3389/fgene.2020.629373 - Andre Altmann, David M Cash, Martina Bocchetta, Carolin Heller, Regina Reynolds, Katrina Moore, Rhian S Convery, David L Thomas, John C van Swieten, Fermin Moreno, Raquel Sanchez-Valle, Barbara Borroni, Robert Laforce, Jr, Mario Masellis, Maria Carmela Tartaglia, Caroline Graff, Daniela Galimberti, James B Rowe, Elizabeth Finger, Matthis Synofzik, Rik Vandenberghe, Alexandre de Mendonça, Fabrizio Tagliavini, Isabel Santana, Simon Ducharme, Chris R Butler, Alex Gerhard, Johannes Levin, Adrian Danek, Giovanni Frisoni, Roberta Ghidoni, Sandro Sorbi, Markus Otto, Mina Ryten, Jonathan D Rohrer, the Genetic FTD Initiative, GENFI
Analysis of brain atrophy and local gene expression in genetic frontotemporal dementia
Brain Communications, 2020, fcaa122, https://doi.org/10.1093/braincomms/fcaa122 - Sean N Hatton, Khoa H Huynh, Leonardo Bonilha, Eugenio Abela, Saud Alhusaini, Andre Altmann, Marina K M Alvim, Akshara R Balachandra, Emanuele Bartolini, Benjamin Bender, Neda Bernasconi, Andrea Bernasconi, Boris Bernhardt, Núria Bargallo, Benoit Caldairou, Maria E Caligiuri, Sarah J A Carr, Gianpiero L Cavalleri, Fernando Cendes, Luis Concha, Esmaeil Davoodi-bojd, Patricia M Desmond, Orrin Devinsky, Colin P Doherty, Martin Domin, John S Duncan, Niels K Focke, Sonya F Foley, Antonio Gambardella, Ezequiel Gleichgerrcht, Renzo Guerrini, Khalid Hamandi, Akari Ishikawa, Simon S Keller, Peter V Kochunov, Raviteja Kotikalapudi, Barbara A K Kreilkamp, Patrick Kwan, Angelo Labate, Soenke Langner, Matteo Lenge, Min Liu, Elaine Lui, Pascal Martin, Mario Mascalchi, José C V Moreira, Marcia E Morita-Sherman, Terence J O’Brien, Heath R Pardoe, José C Pariente, Letícia F Ribeiro, Mark P Richardson, Cristiane S Rocha, Raúl Rodríguez-Cruces, Felix Rosenow, Mariasavina Severino, Benjamin Sinclair, Hamid Soltanian-Zadeh, Pasquale Striano, Peter N Taylor, Rhys H Thomas, Domenico Tortora, Dennis Velakoulis, Annamaria Vezzani, Lucy Vivash, Felix von Podewils, Sjoerd B Vos, Bernd Weber, Gavin P Winston, Clarissa L Yasuda, Alyssa H Zhu, Paul M Thompson, Christopher D Whelan, Neda Jahanshad, Sanjay M Sisodiya, Carrie R McDonald
White matter abnormalities across different epilepsy syndromes in adults: an ENIGMA-Epilepsy study
Brain, 2020, awaa200, https://doi.org/10.1093/brain/awaa200 - Sanjay M Sisodiya, Christopher D Whelan, Sean N Hatton, Khoa Huynh, Andre Altmann, Mina Ryten, Annamaria Vezzani, Maria Eugenia Caligiuri, Angelo Labate, Antonio Gambardella, Victoria Ives‐Deliperi, Stefano Meletti, Brent C Munsell, Leonardo Bonilha, Manuela Tondelli, Michael Rebsamen, Christian Rummel, Anna Elisabetta Vaudano, Roland Wiest, Akshara R Balachandra, Núria Bargalló, Emanuele Bartolini, Andrea Bernasconi, Neda Bernasconi, Boris Bernhardt, Benoit Caldairou, Sarah JA Carr, Gianpiero L Cavalleri, Fernando Cendes, Luis Concha, Patricia M Desmond, Martin Domin, John S Duncan, Niels K Focke, Renzo Guerrini, Khalid Hamandi, Graeme D Jackson, Neda Jahanshad, Reetta Kälviäinen, Simon S Keller, Peter Kochunov, Magdalena A Kowalczyk, Barbara AK Kreilkamp, Patrick Kwan, Sara Lariviere, Matteo Lenge, Seymour M Lopez, Pascal Martin, Mario Mascalchi, José CV Moreira, Marcia E Morita‐Sherman, Heath R Pardoe, Jose C Pariente, Kotikalapudi Raviteja, Cristiane S Rocha, Raúl Rodríguez‐Cruces, Margitta Seeck, Mira KHG Semmelroch, Benjamin Sinclair, Hamid Soltanian‐Zadeh, Dan J Stein, Pasquale Striano, Peter N Taylor, Rhys H Thomas, Sophia I Thomopoulos, Dennis Velakoulis, Lucy Vivash, Bernd Weber, Clarissa Lin Yasuda, Junsong Zhang, Paul M Thompson, Carrie R McDonald, ENIGMA Consortium Epilepsy Working Group
The ENIGMA‐Epilepsy working group: Mapping disease from large data sets
Human brain mapping, 2020, doi: https://doi.org/10.1002/hbm.25037 - Joseph Jacob, Leon Aksman, Nesrin Mogulkoc, Alex J Procter, Bahareh Gholipour, Gary Cross, Joseph Barnett, Christopher J Brereton, Mark G Jones, Coline H van Moorsel, Wouter van Es, Frouke van Beek, Marcel Veltkamp, Sujal R Desai, Eoin Judge, Teresa Burd, Maria Kokosi, Recep Savas, Selen Bayraktaroglu, Andre Altmann, Athol U Wells
Serial CT analysis in idiopathic pulmonary fibrosis: comparison of visual features that determine patient outcome
Thorax, 2020, doi: 10.1136/thoraxjnl-2019-213865 - Paul M. Thompson, Neda Jahanshad, Christopher R. K. Ching, Lauren E. Salminen, Sophia I. Thomopoulos, Joanna Bright, Bernhard T. Baune, Sara Bertolín, Janita Bralten, Willem B. Bruin, Robin Bülow, Jian Chen, Yann Chye, Udo Dannlowski, Carolien G. F. de Kovel, Gary Donohoe, Lisa T. Eyler, Stephen V. Faraone, Pauline Favre, Courtney A. Filippi, Thomas Frodl, Daniel Garijo, Yolanda Gil, Hans J. Grabe, Katrina L. Grasby, Tomas Hajek, Laura K. M. Han, Sean N. Hatton, Kevin Hilbert, Tiffany C. Ho, Laurena Holleran, Georg Homuth, Norbert Hosten, Josselin Houenou, Iliyan Ivanov, Tianye Jia, Sinead Kelly, Marieke Klein, Jun Soo Kwon, Max A. Laansma, Jeanne Leerssen, Ulrike Lueken, Abraham Nunes, Joseph O’ Neill, Nils Opel, Fabrizio Piras, Federica Piras, Merel C. Postema, Elena Pozzi, Natalia Shatokhina, Carles Soriano-Mas, Gianfranco Spalletta, Daqiang Sun, Alexander Teumer, Amanda K. Tilot, Leonardo Tozzi, Celia van der Merwe, Eus J. W. Van Someren, Guido A. van Wingen, Henry Völzke, Esther Walton, Lei Wang, Anderson M. Winkler, Katharina Wittfeld, Margaret J. Wright, Je-Yeon Yun, Guohao Zhang, Yanli Zhang-James, Bhim M. Adhikari, Ingrid Agartz, Moji Aghajani, André Aleman, Robert R. Althoff, Andre Altmann, Ole A. Andreassen, David A. Baron, Brenda L. Bartnik-Olson, Janna Marie Bas-Hoogendam, Arielle R. Baskin-Sommers, Carrie E. Bearden, Laura A. Berner, Premika S. W. Boedhoe, Rachel M. Brouwer, Jan K. Buitelaar, Karen Caeyenberghs, Charlotte A. M. Cecil, Ronald A. Cohen, James H. Cole, Patricia J. Conrod, Stephane A. De Brito, Sonja M. C. de Zwarte, Emily L. Dennis, Sylvane Desrivieres, Danai Dima, Stefan Ehrlich, Carrie Esopenko, Graeme Fairchild, Simon E. Fisher, Jean-Paul Fouche, Clyde Francks, Sophia Frangou, Barbara Franke, Hugh P. Garavan, David C. Glahn, Nynke A. Groenewold, Tiril P. Gurholt, Boris A. Gutman, Tim Hahn, Ian H. Harding, Dennis Hernaus, Derrek P. Hibar, Frank G. Hillary, Martine Hoogman, Hilleke E. Hulshoff Pol, Maria Jalbrzikowski, George A. Karkashadze, Eduard T. Klapwijk, Rebecca C. Knickmeyer, Peter Kochunov, Inga K. Koerte, Xiang-Zhen Kong, Sook-Lei Liew, Alexander P. Lin, Mark W. Logue, Eileen Luders, Fabio Macciardi, Scott Mackey, Andrew R. Mayer, Carrie R. McDonald, Agnes B. McMahon, Sarah E. Medland, Gemma Modinos, Rajendra A. Morey, Sven C. Mueller, Pratik Mukherjee, Leyla Namazova-Baranova, Talia M. Nir, Alexander Olsen, Peristera Paschou, Daniel S. Pine, Fabrizio Pizzagalli, Miguel E. Rentería, Jonathan D. Rohrer, Philipp G. Sämann, Lianne Schmaal, Gunter Schumann, Mark S. Shiroishi, Sanjay M. Sisodiya, Dirk J. A. Smit, Ida E. Sønderby, Dan J. Stein, Jason L. Stein, Masoud Tahmasian, David F. Tate, Jessica A. Turner, Odile A. van den Heuvel, Nic J. A. van der Wee, Ysbrand D. van der Werf, Theo G. M. van Erp, Neeltje E. M. van Haren, Daan van Rooij, Laura S. van Velzen, Ilya M. Veer, Dick J. Veltman, Julio E. Villalon-Reina, Henrik Walter, Christopher D. Whelan, Elisabeth A. Wilde, Mojtaba Zarei, Vladimir Zelman & for the ENIGMA Consortium
ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries
Translational Psychiatry, 2020, 10: 100. doi: 10.1038/s41398-020-0705-1 - Andre Altmann, Marzia A Scelsi, Maryam Shoai, Eric de Silva, Leon M Aksman, David M Cash, John Hardy, Jonathan M Schott
A comprehensive analysis of methods for assessing polygenic burden on Alzheimer’s disease pathology and risk beyond APOE
Brain Communications, 2020, 2(1): fcz047. doi: 10.1093/braincomms/fcz047 - Claire Cury, Marzia A Scelsi, Roberto Toro, Vincent Frouin, Eric Artiges, Antoine Grigis, Andreas Heinz, Hervé Lemaître, Jean-Luc Martinot, Jean-Baptiste Poline, Michael N. Smolka, Henrik Walter, Gunter Schumann, Andre Altmann* , Olivier Colliot* and the IMAGEN Consortium
Genome wide association study of incomplete hippocampal inversion in adolescents
PlosONE, 2020, 15(1): e0227355. doi: 10.1371/journal.pone.0227355 - Leon M Aksman, Marzia A Scelsi, Andre F Marquand, Daniel C Alexander, Sebastien Ourselin, Andre Altmann
Modeling longitudinal imaging biomarkers with parametric Bayesian multi-task learning
Human Brain Mapping, 2019, 40(13):3982-4000. doi: 10.1002/hbm.24682 [preprint] - Joseph Jacob, Catherine M. Owens, Alan S. Brody, Thomas Semple, Tom A. Watson, Alistair Calder, Pilar Garcia-Peña, Paolo Toma, Anand Devaraj, Henry Walton, Antonio Moreno-Galdó, Paul Aurora, Alexandra Rice, Timothy J. Vece, Steve Cunningham, Andre Altmann, Athol U. Wells, Andrew G. Nicholson, Andrew Bush
Evaluation of inter-observer variation for CT identification of childhood interstitial lung disease
ERJ Open Research, 2019, 5(3). pii: 00100-2019. doi: 10.1183/23120541.00100-2019 - Joseph Jacob, Brian Bartholmai, Coline van Moorsel, Srinivasan Rajagopalan, Anand Devaraj, Hendrik van Es, Teng Moua, Frouke van Beek, Ryan Clay, Marcel Veltkamp, Maria Kokosi, Angelo de Lauretis, Eoin Judge, Teresa Burd, Tobias Peikert, Ronald Karwoski, Fabien Maldonado, Elisabetta Renzoni, Toby Maher, Andre Altmann, Athol Wells
Longitudinal prediction of outcome in idiopathic pulmonary fibrosis using automated CT analysis
ERJ, 2019 (in press). [preprint] - Marzia A Scelsi, Raiyan R Khan, Marco Lorenzi, Leigh Christopher, Michael D Greicius, Jonathan M Schott, Sebastien Ourselin, Andre Altmann
- Martina Bocchetta, Juan Eugenio Iglesias, Marzia A Scelsi, David M Cash, M. Jorge Cardoso, Marc Modat, Andre Altmann, Sebastien Ourselin, Jason D Warren, Jonathan D Rohrer
Hippocampal Subfield Volumetry: Differential Pattern of Atrophy in Different Forms of Genetic Frontotemporal Dementia
Journal of Alzheimer’s Disease, 2018, 64(2):497-504. doi: 10.3233/JAD-180195 - Joseph Jacob, Brian J. Bartholmai, Srinivasan Rajagopalan, Coline H.M. van Moorsel, Hendrik W van Es, Frouke T van Beek, Marjolijn H.L. Struik, Maria Kokosi, Ryoko Egashira, Anne Laure Brun, Arjun Nair, Simon L.F. Walsh, Gary Cross , Joseph Barnett, Angelo de Lauretis, Eoin P Judge, Sujal Desai, Ronald Karwoski, Sebastien Ourselin, Elisabetta Renzoni, Toby M. Maher, Andre Altmann, Athol U. Wells
Predicting Outcomes in Idiopathic Pulmonary Fibrosis Using Automated CT Analysis
Am J Respir Crit Care Med., 2018, 198(6):767-776. doi: 10.1164/rccm.201711-2174OC - Marco Lorenzi*, Andre Altmann*, Boris Gutman, Selina Wray, Charles Arber, Derrek P. Hibar, Neda Jahanshad, Jonathan M. Schott, Daniel C. Alexander, Paul M. Thompson, Sebastien Ourselin
Susceptibility of brain atrophy to TRIB3 in Alzheimer’s disease, evidence from functional prioritization in imaging genetics
PNAS, 2018, 115(12):3162-3167. doi: 10.1073/pnas.1706100115 - Christopher D Whelan, Andre Altmann, Juan A Botía, Neda Jahanshad, Derrek P Hibar, Julie Absil, Saud Alhusaini, Marina K M Alvim, Pia Auvinen, Emanuele Bartolini, Felipe P G Bergo, Tauana Bernardes, Karen Blackmon, Barbara Braga, Maria Eugenia Caligiuri, Anna Calvo, Sarah J Carr, Jian Chen, Shuai Chen, Andrea Cherubini, Philippe David, Martin Domin, Sonya Foley, Wendy França, Gerrit Haaker, Dmitry Isaev, Simon S Keller, Raviteja Kotikalapudi, Magdalena A Kowalczyk, Ruben Kuzniecky, Soenke Langner, Matteo Lenge, Kelly M Leyden, Min Liu, Richard Q Loi, Pascal Martin, Mario Mascalchi, Marcia E Morita, Jose C Pariente, Raul Rodríguez-Cruces, Christian Rummel, Taavi Saavalainen, Mira K Semmelroch, Mariasavina Severino, Rhys H Thomas, Manuela Tondelli, Domenico Tortora, Anna Elisabetta Vaudano, Lucy Vivash, Felix von Podewils, Jan Wagner, Bernd Weber, Yi Yao, Clarissa L Yasuda, Guohao Zhang, Nuria Bargalló, Benjamin Bender, Neda Bernasconi, Andrea Bernasconi, Boris C Bernhardt, Ingmar Blümcke, Chad Carlson, Gianpiero L Cavalleri, Fernando Cendes, Luis Concha, Norman Delanty, Chantal Depondt, Orrin Devinsky, Colin P Doherty, Niels K Focke, Antonio Gambardella, Renzo Guerrini, Khalid Hamandi, Graeme D Jackson, Reetta Kälviäinen, Peter Kochunov, Patrick Kwan, Angelo Labate, Carrie R McDonald, Stefano Meletti, Terence J O’Brien, Sebastien Ourselin, Mark P Richardson, Pasquale Striano, Thomas Thesen, Roland Wiest, Junsong Zhang, Annamaria Vezzani, Mina Ryten, Paul M Thompson, Sanjay M Sisodiya
Structural brain abnormalities in the common epilepsies assessed in a worldwide ENIGMA study
Brain, 2018, 141(2), 391–408. doi: 10.1093/brain/awx341 - Sepideh Sadaghiani, Bernard Ng, Andre Altmann, Jean-Baptiste Poline, Tobias Banaschewski, Arun L.W. Bokde, Uli Bromberg, Christian Büchel, Erin Burke Quinlan, Patricia Conrod, Sylvane Desrivières, Herta Flor, Vincent Frouin, Hugh Garavan, Penny Gowland, Jürgen Gallinat, Andreas Heinz, Bernd Ittermann, Jean-Luc Martinot, Marie-Laure Paillère Martinot, Hervé Lemaitre, Frauke Nees, Dimitri Papadopoulos Orfanos, Tomáš Paus, Luise Poustka, Sabina Millenet, Juliane H. Fröhner, Michael N. Smolka, Henrik Walter, Robert Whelan, Gunter Schumann, Valerio Napolioni and Michael Greicius
Overdominant effect of a CHRNA4 polymorphism on cingulo-opercular network activity and cognitive control
Journal of Neuroscience, 2017, 37(40):9657-9666. doi: 10.1523/JNEUROSCI.0991-17.2017 - Andre Altmann*, Manuel S Schröter*, Victor I Spoormaker, Sara A Kiem, Denis Jordan, Rüdiger Ilg, Ed T Bullmore, Michael D Greicius, Michael Czisch, Philipp G Sämann
Validation of non-REM sleep stage decoding from resting state fMRI using linear support vector machines
NeuroImage, 2016, 125, 544-555. doi: 10.1016/j.neuroimage.2015.09.072 - Janine Arloth*, Daniel M Bader*, Simone Röh, Andre Altmann
Re-Annotator: Annotation Pipeline for Microarray Probe Sequences
PLoS ONE, 2015, 10(10): e0139516. doi:10.1371/journal.pone.0139516 [preprint @ bioRxiv] - Andre Altmann, Bernard Ng, Susan Landau, William Jagust, Michael D Greicius
Regional Brain Hypometabolism Is Unrelated to Regional Amyloid Plaque Burden
Brain, 2015, 138 (12), 3743-3746. doi: 10.1093/brain/awv278 - Jonas Richiardi*, Andre Altmann*, Anna-Clare Milazzo, Catie Chang, M. Mallar Chakravarty, Tobias Banaschewski, Gareth J. Barker, Arun L.W. Bokde, Uli Bromberg, Christian Büchel, Patricia Conrod, Mira Fauth-Bühler, Herta Flor, Vincent Frouin, Jürgen Gallinat, Hugh Garavan, Penny Gowland, Andreas Heinz, Hervé Lemaître, Karl F. Mann, Jean-Luc Martinot, Frauke Nees, Tomáš Paus, Zdenka Pausova, Marcella Rietschel, Trevor W. Robbins, Michael N. Smolka, Rainer Spanagel, Andreas Ströhle, Gunter Schumann, Mike Hawrylycz, Jean-Baptiste Poline, Michael D. Greicius and the IMAGEN consortium
Correlated gene expression supports synchronous activity in brain networks
Science, 2015, 348 (6240),1241-1244. doi: 10.1126/science.1255905 - Janine Arloth, Ryan Bogdan, Peter Weber, Goar Frishman, Andreas Menke, Klaus V Wagner, Georgia Balsevich, Mathias V. Schmidt, Nazanin Karbalai, Darina Czamara, Andre Altmann, Dietrich Trümbach, Wolfgang Wurst, Divya Mehta, Manfred Uhr, Torsten Klengel, Angelika Erhardt, Caitlin E. Carey, Emily Drabant Conley, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium (PGC), Andreas Ruepp, Bertram Müller-Myhsok, Ahmad R. Hariri, and Elisabeth B. Binder
Genetic Differences in the Immediate Transcriptome Response to Stress Predict Risk-Related Brain Function and Psychiatric Disorders
Neuron, 2015, 86(5):1189-1202. http://dx.doi.org/10.1016/j.neuron.2015.05.034 - Julia Brenndörfer, André Altmann, Regina Widner-Andrä, Benno Pütz, Darina Czamara, Erik Tilch, Tony Kam-Thong, Peter Weber, Monika Rex-Haffner, Thomas Bettecken, Andrea Bultmann, Bertram Müller-Myhsok, Elisabeth E Binder, Rainer Landgraf, Ludwig Czibere
Connecting Anxiety and Genomic Copy Number Variation: a Genome-Wide Analysis in Mice
PLoS ONE, 2015, 10(5):e0128465. doi: 10.1371/journal.pone.0128465. - Andre Altmann, Lu Tian, Victor W Henderson, Michael D Greicius
Sex modifies APOE-related risk of developing Alzheimer’s Disease
Annals of Neurology, 2014, 75:563–573. doi: 10.1002/ana.24135 - Christiana Labermaier, Christine Kohl, Jakob Hartmann, Christian Devigny, Andre Altmann, Peter Weber, Janine Arloth, Carina Quast, Klaus V Wagner, Sebastian H Scharf, Ludwig Czibere, Regina Widner-Andrä, Julia Brenndörfer, Rainer Landgraf, Felix Hausch, Ken A Jones, Marianne B Müller, Manfred Uhr, Florian Holsboer, Elisabeth B Binder, Mathias V Schmidt
A polymorphism in the crhr1 gene determines stress vulnerability in male mice
Endocrinology, 2014, 155(7):2492–2499. doi: 10.1210/en.2013-1986 - Leo Unger, Andre Altmann, Michael D Greicius
Apolipoprotein E, Gender, and Alzheimer’s Disease: An Overlooked, but Potent and Promising Interaction
Brain Imaging and Behavior, 2014, 8(2):262-73. doi:10.1007/s11682-013-9272-x - Carina Quast, Serena Cuboni, Daniel Bader, André Altmann, Peter Weber, Janine Arloth, Simone Röh, Tanja Brückl, Marcus Ising, Anna Kopczak, Angelika Erhardt, Felix Hausch, Susanne Lucae, Elisabeth Binder
Functional coding variants in SLC6A15, a possible risk gene for major depression
PLoS ONE, 2013, 8(7):e68645. doi:10.1371/journal.pone.0068645 - Divya Mehta, Torsten Klengel, Karen N Conneely, Alicia K Smith, Andre Altmann, Thaddeus W Pace, Monika Rex-Haffner, Anne Loeschner, Mariya Gonik, Kristina B Mercer, Bekh Bradley, Bertram Müller-Myhsok, Kerry J. Ressler, Elisabeth Binder
Childhood maltreatment is associated with distinct genomic and epigenetic profiles in posttraumatic stress disorder
PNAS, 2013, 110(20): 8302–7. doi: 10.1073/pnas.1217750110. - Andre Altmann, Carina Quast, Peter Weber
Detecting Rare Variants for Psychiatric Disorders Using Next Generation Sequencing: A Methods Primer
Current Psychiatry Reports, 2012, 15:333. doi: 10.1007/s11920-012-0333-4 - Benno Puetz, Tony Kam-Thong, Nazanin Karbalai, Andre Altmann, Bertram Mueller-Myhsok
Cost-effective GPU-Grid for Genome-wide Epistasis Calculations
Methods of Information in Medicine, 2013, 53:93-97. doi: 10.3414/ME11-02-0049 - Andre Altmann, Peter Weber, Daniel Bader, Michael Preuss, Elisabeth B Binder, Bertram Mueller-Myhsok
A Beginners Guide To SNP Calling From High-Throughput DNA-Sequencing Data
Human Genetics, 2012, 131(10):1541-1554. doi: 10.1007/s00439-012-1213-z - Carina Quast, Andre Altmann, Janine Arloth, Daniel Bader, Angela Heck, Hildegard Pfister, Bertram Mueller-Myhsok, Angelika Erhardt, Elisabeth B Binder
Rare variants in TMEM132D in a case-control sample for panic disorder
Am J Med Genet Part B, 2012, 159B(8):896-907. doi: 10.1002/ajmg.b.32096 - Tony Kam-Thong*, Chloe-Agathe Azencott*, Lawrence Cayton, Benno Puetz, Andre Altmann, Nazanin Karbalai, Philipp G Saemann, Bernhard Schoelkopf, Bertram Mueller-Myhsok+, Karsten M. Borgwardt+
GLIDE: GPU-Based Linear Regression for Detection of Epistasis
Hum Hered, 2012, 73:220-236. doi: 10.1159/000341885 - Mark Oette, Eugen Schülter, Michal Rosen-Zvi, Yardena Peres, Maurizio Zazzi, Anders Sönnerborg, Daniel Struck, Andre Altmann, Rolf Kaiser, the EuResist Network Study Group
Efficacy of Antiretroviral Therapy Switch in HIV-Infected Patients: A 10-Year Analysis of the EuResist Cohort
Intervirology, 2012, 55:160–166. doi:10.1159/000332018 - Maurizio Zazzi, Francesca Incardona, Michal Rosen-Zvi, Mattia Prosperi, Thomas Lengauer, Andre Altmann, Anders Sönnerborg, Tamar Lavee, Eugen Schülter, Rolf Kaiser
Predicting Response to Antiretroviral treatment by Machine Learning: The EuResist Project
Intervirology, 2012, 55:123–127. doi:10.1159/000332008 - Glenn Lawyer, Andre Altmann, Alexander Thielen, Maurizio Zazzi, Anders Sönnerborg, Thomas Lengauer
HIV-1 mutational pathways under multidrug therapy
AIDS Research and Therapy, 2011, 8:26. doi:10.1186/1742-6405-8-26 - Hiroto Saigo*, Andre Altmann*, Jasmina Bogojeska, Fabian Müller, Sebastian Nowozin, Thomas Lengauer
Learning from past treatments and their outcome improves prediction of in vivo response to anti-HIV therapy
Statistical Applications in Genetics and Molecular Biology, 2011, 10(1), art6. doi:10.2202/1544-6115.1604 - Mattia CF Prosperi, Michal Rosen-Zvi, Andre Altmann, Maurizio Zazzi, Simona Di Giambenedetto, Rolf Kaiser, Eugen Schülter, Daniel Struck, Peter Sloot, David A. van de Vijver, Anne-Mieke Vandamme, Anders Sönnerborg, for the EuResist and Virolab study groups
Antiretroviral Therapy Optimisation without Genotype Resistance Testing: A Perspective on Treatment History Based Models
PLoS ONE, 2010, 5:10, e13753. doi:10.1371/journal.pone.0013753 - Jasmina Bogojeska, Steffen Bickel, Andre Altmann, Thomas Lengauer
Dealing with sparse data in predicting outcomes of HIV combination therapies
Bioinformatics, 2010, 26:17, 2085-2092. doi:10.1093/bioinformatics/btq361 - Maurizio Zazzi, Rolf Kaiser, Anders Sönnerborg, Daniel Struck, Andre Altmann, Mattia Prosperi, Michal Rosen-Zvi, Andrea Petroczi, Yardena Peres, Eugen Schülter, Charles Boucher, Francoise Brun-Vezinet, Richard Harigan, Lynn Morris, Martin Obermeier, Carlo Federico Perno, Robert Shafer, Anne-Mieke Vandamme, Kristel van Laethem, Annemarie Wensing, Thomas Lengauer, Francesca Incardona
Prediction of Response to Antiretroviral Therapy by Human Experts and by the EuResist Data-Driven Expert System (the EVE Study)
HIV Medicine, 2010. doi:10.1111/j.1468-1293.2010.00871.x - Andre Altmann*, Laura Tolosi*, Oliver Sander, Thomas Lengauer
Permutation importance: a corrected feature importance measure
Bioinformatics, 2010, 26:10, 1340-1347. doi:10.1093/bioinformatics/btq134
Source Code (on GitHub) - Hendrik Weisser, Andre Altmann, Saleta Sierra, Francesca Incardona, Daniel Struck, Anders Sönnerborg, Rolf Kaiser, Maurizio Zazzi, Monika Tschochner, Hauke Walter, Thomas Lengauer
Only slight impact of predicted replicative capacity for therapy response prediction
PLoS ONE, 2010, 5:2, e9044. doi:10.1371/journal.pone.0009044 - Thomas Lengauer, Andre Altmann, Alexander Thielen, Rolf Kaiser
Chasing the AIDS virus
Communications of the ACM, 2010, 53:3, 66-74. doi:10.1145/1666420.1666440 - Thomas Lengauer, Andre Altmann, Alexander Thielen
Bioinformatische Unterstützung der Auswahl von HIV-Therapien
Informatik-Spektrum, 2009, 32:4, 320-331. doi:10.1007/s00287-009-0352-7 - Nadine Sichtig, Saleta Sierra, Rolf Kaiser, Martin Däumer, Stefan Reuter, Eugen Schülter, Andre Altmann, Gerd Fätkenheuer, Ulf Dittmer, Herbert Pfister, Stefan Esser
Evolution of Raltegravir Resistance During Therapy
Journal of Antimicrobial Chemotherapy, 2009, 64, 25-32. doi:10.1093/jac/dkp153 - Mattia CF Prosperi, Andre Altmann, Michal Rosen-Zvi, Ehud Aharoni, Gabor Borgulya, Fulop Bazso, Anders Sönnerborg, Yarenda Peres, Eugen Schülter, Daniel Struck, Giovanni Ulivi, Francesca Incardona, Anne-Mieke Vandamme, Jürgen Vercauteren and Maurizio Zazzi for the EuResist and Virolab study groups
Investigation of Expert Rule Bases, Logistic Regression, and Non-Linear Machine Learning Techniques for Predicting Response to Antiretroviral Treatment
Antiviral Thearapy, 2009, 14: 433-442. - Andre Altmann*, Tobias Sing*, Hans Vermeiren, Bart Winters, Elke Van Craenenbroeck, Koen Van der Borght, Soo-Yon Rhee, Robert W Shafer, Eugen Schülter, Rolf Kaiser, Yardena Peres, Anders Sönnerborg, W Jeffrey Fessel, Francesca Incardona, Maurizio Zazzi, Lee Bacheler, Herman Van Vlijmen, Thomas Lengauer
Advantages of Predicted Phenotypes and Statistical Learning Models in Inferring Virological Response to Antiretroviral Therapy from HIV Genotype
Antiviral Thearapy, 2009, 14: 273-283. - Andre Altmann, Martin Däumer, Niko Beerenwinkel, Yardena Peres, Eugen Schülter, Joachim Büch, Soo-Yon Rhee, Anders Sönnerborg, Jeffrey Fessel, Robert W Shafer, Maurizio Zazzi, Rolf Kaiser and Thomas Lengauer
Predicting response to combination antiretroviral therapy: retrospective validation of geno2pheno-THEO on a large clinical database
Journal of Infectious Diseases, 2009, 199(7), 999-1006. - Andre Altmann, Michal Rosen-Zvi , Mattia Prosperi, Ehud Aharoni, Hani Neuvirth, Anders Sönnerborg, Eugen Schülter, Joachim Büch, Daniel Struck, Yardena Peres, Francesca Incardona, Rolf Kaiser, Maurizio Zazzi and Thomas Lengauer
Comparison of Classifier Fusion Methods for Predicting Response to Anti HIV-1 Therapy
PLoS ONE, 2008, 3(10): e3470. - Jasmina Bogojeska, Adrian Alexa, Andre Altmann, Thomas Lengauer and Jörg Rahnenführer
Rtreemix: an R package for estimating evolutionary pathways and genetic progression scores
Bioinformatics, 2008, 24 (20): 2391. - Andre Altmann, Niko Beerenwinkel, Tobias Sing, Igor Savenkov, Martin Däumer, Rolf Kaiser, Soo-Yon Rhee, W Jeffrey Fessel, Robert W Shafer and Thomas Lengauer
Improved prediction of response to antiretroviral combination therapy using the genetic barrier to drug resistance
Antiviral Therapy, 2007, 12 (2):169-178.
Conference Papers
- Ana Lawry Aguila, James Chapman, Andre Altmann
Multi-modal Variational Autoencoders for normative modelling across multiple imaging modalities
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2023. [pre-print] - Ana Lawry Aguila, James Chapman, Mohammed Janahi, Andre Altmann
Conditional VAEs for Confound Removal and Normative Modelling of Neurodegenerative Diseases.
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2022, 430-440. - Heba Elshatoury, Federica Cruciani, Francesco Zumerle, Silvia F Storti, André Altmann, Marco Lorenzi, Gholamreza Anbarjafari, Gloria Menegaz, Ilaria Boscolo Galazzo
Disentangling the association between genetics and functional connectivity in Mild Cognitive Impairment
IEEE EMBS International Conference on Biomedical and Health Informatics (BHI), 2021, 1-4. - Santiago Silva, Andre Altmann, Boris Gutman, Marco Lorenzi
Fed-BioMed: A General Open-Source Frontend Framework for Federated Learning in Healthcare.
Domain Adaptation and Representation Transfer, and Distributed and Collaborative Learning. DART 2020, DCL 2020. 2020, Lecture Notes in Computer Science, vol 12444. Springer, Cham. https://doi.org/10.1007/978-3-030-60548-3_20 - Andre Altmann, Janaina Mourao-Miranda
Evidence for bias of genetic ancestry in resting state functional MRI
IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), 2019, 275 – 279. doi: 10.1109/ISBI.2019.8759284 - Santiago Silva, Boris Gutman, Eduardo Romero, Paul M Thompson, Andre Altmann, Marco Lorenzi
Federated Learning in Distributed Medical Databases: Meta-Analysis of Large-Scale Subcortical Brain Data
IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), 2019, 270 – 274. doi: 10.1109/ISBI.2019.8759317 - Marco Lorenzi, Boris Gutman, Paul M Thompson, Daniel C Alexander, Sebastien Ourselin, Andre Altmann
Secure multivariate large-scale multi-centric analysis through on-line learning: an imaging genetics case study
12th International Symposium on Medical Information Processing and Analysis (SIPAIM 2016), 2016. doi: 10.1117/12.2256799 - Marco Lorenzi, Boris Gutman, Derrek P Hibar, Andre Altmann, Neda Jahanashad, Paul M Thompson, Sebastien Ourselin
Partial Least Squares Modelling For Imaging-Genetics in Alzheimer’s Disease: Plausibility and Generalization
International Symposium on Biomedical Imaging (ISBI 2016), 2016. doi: 10.1109/ISBI.2016.7493396 - Bernard Ng, Anna-Claire Milazzo, Andre Altmann
Node-based Gaussian Graphical Model for Identifying Discriminative Brain Regions from Connectivity Graphs
Machine Learning in Medical Imaging, Lecture Notes in Computer Science, 2015, 9352:44-51. doi:10.1007/978-3-319-24888-2_6 [PDF]
Best Paper Award! - Andre Altmann, Bernard Ng
Joint Feature Extraction from Functional Connectivity Graphs with Multi-task Feature Learning
PRNI 2015, 2015. doi:10.1109/PRNI.2015.17 - Jonas Richiardi, Andre Altmann, Michael Greicius
Two test statistics for cross-modal graph community significance [pdf]
PRNI 2013, 2013. doi:10.1109/PRNI.2013.27 - Andre Altmann, Peter Weber, Carina Quast, Monika Rex-Haffner, Elisabeth B Binder, Bertram Müller-Myhsok
vipR: variant identification in pooled DNA using R
Bioinformatics, 2011, 27 (13):i77-84. doi:10.1093/bioinformatics/btr205 [conference presentation] - Juliane Perner , Andre Altmann and Thomas Lengauer
Semi-Supervised Learning for Improving Prediction of HIV Drug Resistance
Lecture Notes in Informatics (Proceedings of GCB2009), 2009 - Michal Rosen-Zvi , Andre Altmann, Mattia Prosperi, Ehud Aharoni, Hani Neuvirth, Anders Sönnerborg, Eugen Schülter, Daniel Struck, Yardena Peres, Francesca Incardona, Rolf Kaiser, Maurizio Zazzi and Thomas Lengauer
Selecting anti-HIV therapies based on a variety of genomic and clinical factors
Bioinformatics, 2008, 24 (13):i399-406.
Preprints
- Andre Altmann, DavidM Cash, Martina Bocchetta, Carolin Heller, Regina Reynolds, Katrina Moore, Rhian S Convery, David L Thomas, John van Swieten, Fermin Moreno, Raquel Sanchez-Valle, Barbara Borroni, Robert Laforce Jr, Mario Masellis, Maria Carmela Tartaglia, Caroline Graff, Daniela Galimberti, James B. Rowe, Elizabeth Finger, Matthis Synofzik, Rik Vandenberghe, Alexandre de Mendonça, Fabrizio Tagliavini, Isabel Santana, Simon Ducharme, Chris Butler, Alex Gerhard, Johannes Levin, Adrian Danek, Giovanni Frisoni, Roberta Ghidoni, Sandro Sorbi, Markus Otto, Mina Ryten, Jonathan D Rohrer, on behalf of the Genetic FTD Initiative, GENFI
Analysis of brain atrophy and local gene expression implicates astrocytes in Frontotemporal dementia
bioRxiv, 2019 (dec), doi: 10.1101/2019.12.11.872143 - Marzia Antonella Scelsi, Valerio Napolioni, Michael D Greicius, Andre Altmann, Alzheimer’s Disease Neuroimaging Initiative, Alzheimer’s Disease Sequencing Project
Network propagation of rare mutations in Alzheimer’s disease reveals tissue-specific hub genes and communities
bioRxiv, 2019 (sep), doi: https://doi.org/10.1101/781203 - Paul M Thompson, …, Andre Altmann, …, Vladimir Zelman
ENIGMA and Global Neuroscience: A Decade of Large-Scale Studies of the Brain in Health and Disease across more than 40 Countries
PsyArxiv, 2019, doi: https://doi.org/10.31234/osf.io/qnsh7 - Leon M Aksman, Marzia A Scelsi, Andre F Marquand, Daniel C Alexander, Sebastien Ourselin, Andre Altmann
Modeling longitudinal imaging biomarkers with parametric Bayesian multi-task learning - Longitudinal prediction of outcome in idiopathic pulmonary fibrosis using automated CT analysis
bioRxiv, 2018 (dec), doi: https://doi.org/10.1101/493544 - bioRxiv, 2018 (nov), doi: https://doi.org/10.1101/470518
- Andre Altmann, Janaina Mourao-Miranda
Evidence for bias of genetic ancestry in resting state functional MRI
bioRxiv, 2018 (oct), doi: 10.1101/440776 - Santiago Silva, Boris Gutman, Eduardo Romero, Paul M Thompson, Andre Altmann, Marco Lorenzi
Federated Learning in Distributed Medical Databases: Meta-Analysis of Large-Scale Subcortical Brain Data
arXiv, 2018 (Oct), doi: - Vasiliki Chatzi, Rui Pedro AG Teixeira, John Shawe-Taylor, Andre Altmann, Owen G O’Daly, Daan Christiaens, Jessica Schrouff, J-Donald Tournier
Grey matter biomarker identification in Schizophrenia: detecting regional alterations and their underlying substrates
bioRxiv, 2018 (June), doi: 10.1101/357954 - Jonas Richiardi, Andre Altmann, Michael D Greicius
Distance Is Not Everything In Imaging Genomics Of Functional Networks: Reply To A Commentary On Correlated Gene Expression Supports Synchronous Activity In Brain Networks
bioRxiv, 2017 (May), doi: 10.1101/132746 - Janine Arloth, Daniel M Bader, Simone Röh, Andre Altmann
Re-Annotator: Annotation Pipeline for Microarrays
bioRxiv, 2015, doi:10.1101/019596
Book Chapters
- Marco Lorenzi, Marie Deprez, Irene Balelli, Ana L. Aguila, and Andre Altmann
Integration of Multimodal Data
In Machine Learning for Brain Disorders, Series: Neuromethods, Vol. 197, Springer, 2023, Editor: Olivier Colliot. - Jessica S. Damoiseaux, Andre Altmann, Jonas Richiardi, and Sepideh Sadaghiani
Applications of MRI Connectomics
PsyArXiv. March 1. doi:10.31234/osf.io/u4y8s. - Marco Lorenzi, Andre Altmann
Imaging Genetics
in Medical Image Analysis (1st Edition), September 2023
Editors: A Frangi, J Prince J, M Sonka - Andre Altmann, Peter Weber
Targeted Re-Sequencing in Psychiatric Disorders
in Applied Neurogenomics, Series: Neuromethods, Vol. 97, Springer 2015 Editor: Jain, Kewal K.
Theses
- Andre Altmann
Bioinformatical Approaches to Ranking of anti-HIV Therapies and Planning of Treatment Schedules
PhD Thesis, Saarland University, Saarbrücken, Germany, 2010. - Andre Altmann
Lattice Rescoring and Log-Linear System Combination
Diploma Thesis, RWTH Aaachen, Aachen, Germany, 2005.